EnhancerDB
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  3. rs554695586[chr16:87886729]
Enhancers that have rs554695586[chr16:87886729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs554695586[chr16:87886729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87886467 87886937 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21735200
chr16 87886467 87886937 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108221269
chr16 87886719 87886733 EBF1 JASPAR yes 12247298
chr16 87886720 87886731 EBF1 JASPAR yes 12247299
chr16 87886721 87886732 EBF1 JASPAR yes 12247300
Genes associated with rs554695586[chr16:87886729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More