EnhancerDB
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  3. rs554710812[chr17:49036611]
Enhancers that have rs554710812[chr17:49036611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554710812[chr17:49036611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49035060 49036748 ZNF143 GTRD no Epithelial (MCF-7) 21771875
chr17 49035203 49036690 ZNF143 GTRD no Epithelial (MCF-7) 21771877
chr17 49035215 49036679 ZNF143 GTRD no Epithelial (MCF-7) 21771879
chr17 49035244 49036768 ZNF143 GTRD no Epithelial (MCF-7) 21771882
chr17 49035273 49036846 ZNF143 GTRD no Epithelial (MCF-7) 21771885
chr17 49035304 49036652 TCF7L2 GTRD no Colon (HCT116) 21771889
chr17 49035305 49036614 ZNF143 GTRD no Epithelial (MCF-7) 21771890
chr17 49035317 49037099 ZNF143 GTRD no Epithelial (MCF-7) 21771891
chr17 49035348 49036710 ZNF143 GTRD no Epithelial (MCF-7) 21771894
chr17 49035418 49036945 ZNF143 GTRD no Epithelial (MCF-7) 21771903
chr17 49035509 49036689 ZNF143 GTRD no Epithelial (MCF-7) 21771909
chr17 49035686 49036625 ZNF274 GTRD no Blood (GM12878) 21771921
chr17 49035721 49036753 ZNF274 GTRD no Bone Marrow (K562) 21771929
chr17 49035764 49036640 ZNF274 GTRD no Bone Marrow (K562) 21771936
chr17 49035764 49036671 ZNF274 GTRD no Liver (HepG2) 21771937
chr17 49035794 49036748 ZNF274 GTRD no Cervix (HeLa-S3) 21771944
chr17 49035806 49036746 ZNF274 GTRD no Blood (GM12878) 21771946
chr17 49036609 49036619 ZNF740 JASPAR yes 54739361
chr17 49036609 49036629 RREB1 JASPAR yes 54739362
chr17 49036610 49036620 SP1 JASPAR yes 54739363
chr17 49036610 49036620 ZNF740 JASPAR yes 54739364
chr17 49036611 49036621 SP1 JASPAR yes 54739365
chr17 49036611 49036621 ZNF740 JASPAR yes 54739366
chr17 49036611 49036631 RREB1 JASPAR yes 54739367
Genes associated with rs554710812[chr17:49036611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More