EnhancerDB
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  3. rs554713311[chr17:48930561]
Enhancers that have rs554713311[chr17:48930561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs554713311[chr17:48930561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48927924 48932539 ZNF274 GTRD no Liver (HepG2) 21769956
chr17 48928182 48931249 ZNF274 GTRD no Liver (HepG2) 21769958
chr17 48928376 48931225 ZNF274 GTRD no Liver (HepG2) 21769960
chr17 48929608 48931073 ZNF274 GTRD no Liver (HepG2) 21769985
chr17 48930020 48931126 ZNF274 GTRD no Liver (HepG2) 21769987
chr17 48930271 48930983 ZNF274 GTRD no Liver (HepG2) 21769988
chr17 48930281 48931039 ZNF274 GTRD no Liver (HepG2) 21769989
chr17 48930388 48930711 ZNF143 GTRD no Epithelial (MCF-7) 21769990
chr17 48930506 48931050 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21769992
chr17 48930529 48930969 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21769993
chr17 48930558 48930571 DUXA JASPAR yes 54725567
chr17 48930559 48930570 DUX4 JASPAR yes 54725568
chr17 48930559 48930570 PHOX2A JASPAR yes 54725569
chr17 48930559 48930570 PROP1 JASPAR yes 54725570
Genes associated with rs554713311[chr17:48930561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More