EnhancerDB
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  3. rs554772537[chr1:224384378]
Enhancers that have rs554772537[chr1:224384378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554772537[chr1:224384378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224384369 224384819 TCF7L2 GTRD no Colon (HCT116) 21384194
chr1 224384372 224384384 IRF1 JASPAR yes 35692494
Genes associated with rs554772537[chr1:224384378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More