EnhancerDB
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  3. rs554773026[chr5:171399098]
Enhancers that have rs554773026[chr5:171399098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs554773026[chr5:171399098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171399087 171399108 REST JASPAR yes 67752666
chr5 171399088 171399107 REST JASPAR yes 67752667
chr5 171399092 171399102 SP1 JASPAR yes 67752668
Genes associated with rs554773026[chr5:171399098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More