EnhancerDB
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  3. rs554786861[chr17:41401407]
Enhancers that have rs554786861[chr17:41401407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41397773 41404212 enh48037
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (OCI-LY7) Stomach Muscle (A673) Breast Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554786861[chr17:41401407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41401393 41401408 HNF1A JASPAR yes 54335073
chr17 41401394 41401407 HNF1B JASPAR yes 54335075
chr17 41401394 41401408 POU4F1 JASPAR yes 54335076
chr17 41401394 41401410 POU4F2 JASPAR yes 54335077
chr17 41401394 41401410 POU4F3 JASPAR yes 54335078
chr17 41401395 41401407 HNF1B JASPAR yes 54335079
chr17 41401396 41401410 ONECUT2 JASPAR yes 54335080
chr17 41401399 41401409 CUX2 JASPAR yes 54335081
chr17 41401399 41401409 PAX3 JASPAR yes 54335082
chr17 41401399 41401409 PAX7 JASPAR yes 54335083
chr17 41401406 41401418 POU3F1 JASPAR yes 54335084
chr17 41401406 41401418 POU3F2 JASPAR yes 54335085
Genes associated with rs554786861[chr17:41401407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More