EnhancerDB
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  3. rs554806830[chr1:25046824]
Enhancers that have rs554806830[chr1:25046824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554806830[chr1:25046824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25046815 25046825 GABPA JASPAR yes 27522781
chr1 25046815 25046826 FLI1 JASPAR yes 27522782
chr1 25046816 25046824 EHF JASPAR yes 27522783
chr1 25046822 25046826 LFA1 TRANSFAC yes 27522784
chr1 25046823 25046835 INSM1 JASPAR yes 27522785
Genes associated with rs554806830[chr1:25046824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More