EnhancerDB
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  3. rs554828056[chr2:238099389]
Enhancers that have rs554828056[chr2:238099389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238097785 238124624 enh19388
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673) Heart
Transcript factors that have rs554828056[chr2:238099389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238099389 238099402 SMAD2 JASPAR yes 82090410
Genes associated with rs554828056[chr2:238099389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More