EnhancerDB
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  3. rs554850153[chr6:25005003]
Enhancers that have rs554850153[chr6:25005003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs554850153[chr6:25005003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25004997 25005017 RREB1 JASPAR yes 100812186
chr6 25004999 25005019 RREB1 JASPAR yes 100812187
chr6 25005001 25005021 RREB1 JASPAR yes 100812188
Genes associated with rs554850153[chr6:25005003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More