EnhancerDB
  1. Home
  2. SNP
  3. rs554875108[chr17:41402257]
Enhancers that have rs554875108[chr17:41402257]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41397773 41404212 enh48037
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (OCI-LY7) Stomach Muscle (A673) Breast Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554875108[chr17:41402257]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41401961 41402283 ZNF143 GTRD no Epithelial (MCF-7) 21759634
chr17 41402108 41402298 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21759635
chr17 41402239 41402260 ZNF263 JASPAR yes 54335202
chr17 41402243 41402258 AR JASPAR yes 54335203
chr17 41402253 41402258 ETS2 TRANSFAC yes 54335204
Genes associated with rs554875108[chr17:41402257], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More