EnhancerDB
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  3. rs554885031[chr1:110420519]
Enhancers that have rs554885031[chr1:110420519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554885031[chr1:110420519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328135
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820486
chr1 110419979 110420559 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820505
chr1 110420034 110420663 CTCF UCSC Txn Factor no Conserved 107820512
chr1 110420514 110420529 ZBTB33 JASPAR yes 31448878
Genes associated with rs554885031[chr1:110420519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More