EnhancerDB
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  3. rs554907991[chr1:212083887]
Enhancers that have rs554907991[chr1:212083887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs554907991[chr1:212083887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212083843 212084173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377467
chr1 212083868 212084112 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377468
chr1 212083877 212083888 HOXA10 JASPAR yes 35090155
chr1 212083878 212083888 HOXD13 JASPAR yes 35090156
chr1 212083879 212083889 HOXA13 JASPAR yes 35090157
chr1 212083879 212083889 HOXB13 JASPAR yes 35090158
Genes associated with rs554907991[chr1:212083887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More