EnhancerDB
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  3. rs554909424[chr3:16170924]
Enhancers that have rs554909424[chr3:16170924]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16169520 16195495 enh20384
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Heart
Transcript factors that have rs554909424[chr3:16170924]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16170911 16170931 TBX19 JASPAR yes 704285
chr3 16170920 16170931 TBX20 JASPAR yes 704287
chr3 16170922 16170936 RXRB JASPAR yes 704288
Genes associated with rs554909424[chr3:16170924], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More