EnhancerDB
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  3. rs554910889[chr6:25363620]
Enhancers that have rs554910889[chr6:25363620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs554910889[chr6:25363620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25363614 25363630 SOX8 JASPAR yes 100851612
chr6 25363618 25363624 ETS1 JASPAR yes 100851613
chr6 25363618 25363624 SPI1 JASPAR yes 100851614
Genes associated with rs554910889[chr6:25363620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More