EnhancerDB
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  3. rs554930849[chr16:87511225]
Enhancers that have rs554930849[chr16:87511225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554930849[chr16:87511225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87511216 87511228 FOXC2 JASPAR yes 12220506
chr16 87511217 87511228 FOXB1 JASPAR yes 12220507
chr16 87511217 87511228 FOXC1 JASPAR yes 12220508
chr16 87511223 87511230 NKX3-1 JASPAR yes 12220510
Genes associated with rs554930849[chr16:87511225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More