EnhancerDB
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  3. rs554947109[chr16:69431953]
Enhancers that have rs554947109[chr16:69431953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69423651 69440851 enh16750
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554947109[chr16:69431953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69431830 69432406 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108203186
chr16 69431830 69432642 ZNF274 GTRD no Cervix (HeLa-S3) 21711619
chr16 69431830 69432642 ZNF274 GTRD no Cervix (HeLa-S3) 108203187
chr16 69431835 69432375 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108203188
chr16 69431851 69432447 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21711620
chr16 69431851 69432447 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108203189
chr16 69431872 69432518 ZNF274 GTRD no Blood (GM12878) 108203190
chr16 69431881 69432345 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21711621
chr16 69431881 69432345 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108203191
chr16 69431881 69432572 POLR2A UCSC Txn Factor no Conserved 108203192
chr16 69431883 69432387 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21711622
chr16 69431883 69432387 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108203193
chr16 69431898 69432382 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108203194
chr16 69431945 69431959 IRF7 JASPAR yes 11263711
Genes associated with rs554947109[chr16:69431953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More