EnhancerDB
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  3. rs554948304[chr1:22220150]
Enhancers that have rs554948304[chr1:22220150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554948304[chr1:22220150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22220141 22220151 NFKB1 JASPAR yes 27328307
chr1 22220141 22220152 NFKB1 JASPAR yes 27328308
chr1 22220145 22220154 THAP1 JASPAR yes 27328309
chr1 22220146 22220158 TFAP2A JASPAR yes 27328310
chr1 22220146 22220158 TFAP2B JASPAR yes 27328311
chr1 22220146 22220158 TFAP2C JASPAR yes 27328312
Genes associated with rs554948304[chr1:22220150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More