EnhancerDB
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  3. rs554949355[chr12:65018978]
Enhancers that have rs554949355[chr12:65018978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554949355[chr12:65018978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65018855 65019371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552815
chr12 65018855 65019371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041801
chr12 65018878 65019414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552816
chr12 65018878 65019414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041802
chr12 65018879 65019409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552817
chr12 65018879 65019409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041803
chr12 65018893 65019537 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552818
chr12 65018893 65019537 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041804
chr12 65018909 65019379 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552819
chr12 65018909 65019379 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041805
chr12 65018918 65019414 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21552820
chr12 65018918 65019414 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108041806
chr12 65018963 65019647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552821
chr12 65018963 65019647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041807
chr12 65018969 65019185 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108041808
chr12 65018969 65019199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552822
chr12 65018969 65019199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041809
chr12 65018976 65019632 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108041810
Genes associated with rs554949355[chr12:65018978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More