EnhancerDB
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  3. rs554949523[chr3:57940778]
Enhancers that have rs554949523[chr3:57940778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57932901 57950075 enh20645
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554949523[chr3:57940778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57940772 57940784 ELF1 JASPAR yes 2657083
chr3 57940772 57940785 ELF3 JASPAR yes 2657084
chr3 57940773 57940784 SPDEF JASPAR yes 2657085
chr3 57940774 57940783 ELK4 JASPAR yes 2657086
chr3 57940774 57940784 ELK1 JASPAR yes 2657087
chr3 57940774 57940784 ELK3 JASPAR yes 2657088
chr3 57940774 57940784 ERF JASPAR yes 2657089
chr3 57940774 57940784 ERG JASPAR yes 2657090
chr3 57940774 57940784 ETS1 JASPAR yes 2657091
chr3 57940774 57940784 ETV1 JASPAR yes 2657092
chr3 57940774 57940784 ETV3 JASPAR yes 2657093
chr3 57940774 57940784 ETV4 JASPAR yes 2657094
chr3 57940774 57940784 ETV5 JASPAR yes 2657095
chr3 57940774 57940784 FEV JASPAR yes 2657096
chr3 57940774 57940784 FLI1 JASPAR yes 2657097
chr3 57940774 57940785 FLI1 JASPAR yes 2657098
Genes associated with rs554949523[chr3:57940778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More