EnhancerDB
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  3. rs554955957[chr17:75422424]
Enhancers that have rs554955957[chr17:75422424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 75422359 75422648 vista26119
VISTA
Transcript factors that have rs554955957[chr17:75422424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75421982 75422522 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108299013
chr17 75422253 75422697 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21790657
chr17 75422253 75422697 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108299014
chr17 75422335 75422591 CEBPB UCSC Txn Factor no Conserved 108299015
chr17 75422335 75422591 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108299016
chr17 75422340 75422564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21790658
chr17 75422340 75422564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108299017
chr17 75422370 75422690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21790659
chr17 75422370 75422690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108299018
chr17 75422370 75423003 JUND UCSC Txn Factor no Conserved 108299019
chr17 75422394 75422624 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21790660
chr17 75422394 75422624 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108299020
chr17 75422415 75422695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21790661
chr17 75422415 75422695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108299021
chr17 75422417 75422431 PLAG1 JASPAR yes 21303324
chr17 75422417 75422431 PLAG1 JASPAR yes 56080968
chr17 75422418 75422432 PLAG1 JASPAR yes 21303325
chr17 75422418 75422432 PLAG1 JASPAR yes 56080969
chr17 75422419 75422433 PLAG1 JASPAR yes 21303326
chr17 75422419 75422433 PLAG1 JASPAR yes 56080970
chr17 75422419 75422643 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21790662
chr17 75422419 75422643 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108299022
chr17 75422421 75422646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108299023
chr17 75422424 75422704 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21790663
chr17 75422424 75422704 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108299024
Genes associated with rs554955957[chr17:75422424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More