EnhancerDB
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  3. rs554956[chr3:189903318]
Enhancers that have rs554956[chr3:189903318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189883257 189906215 enh36261
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs554956[chr3:189903318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189903313 189903318 SP1 TRANSFAC yes 8629647
chr3 189903314 189903319 SP1 TRANSFAC yes 8629648
chr3 189903314 189903320 SP1 TRANSFAC yes 8629649
chr3 189903317 189903327 RELA JASPAR yes 8629650
chr3 189903317 189903327 REL JASPAR yes 8629651
chr3 189903317 189903328 NFKB1 JASPAR yes 8629652
Genes associated with rs554956[chr3:189903318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More