EnhancerDB
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  3. rs554958593[chr2:234161985]
Enhancers that have rs554958593[chr2:234161985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 234147285 234162255 enh48435
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs554958593[chr2:234161985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 234161974 234161994 RREB1 JASPAR yes 81817427
chr2 234161975 234161996 IRF1 JASPAR yes 81817428
chr2 234161980 234162001 IRF1 JASPAR yes 81817429
chr2 234161981 234161987 TCF4 TRANSFAC yes 81817430
chr2 234161981 234161996 FOXP1 JASPAR yes 81817431
chr2 234161981 234162002 IRF1 JASPAR yes 81817432
chr2 234161982 234161993 FOXP2 JASPAR yes 81817433
chr2 234161982 234161994 FOXC2 JASPAR yes 81817434
chr2 234161982 234161997 STAT2 JASPAR yes 81817435
chr2 234161982 234162003 IRF1 JASPAR yes 81817436
chr2 234161983 234161998 FOXP1 JASPAR yes 81817437
chr2 234161983 234162004 IRF1 JASPAR yes 81817438
chr2 234161984 234162005 IRF1 JASPAR yes 81817439
chr2 234161985 234162000 FOXP1 JASPAR yes 81817440
chr2 234161985 234162006 IRF1 JASPAR yes 81817441
Genes associated with rs554958593[chr2:234161985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More