EnhancerDB
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  3. rs554977577[chr12:124988019]
Enhancers that have rs554977577[chr12:124988019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554977577[chr12:124988019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124988008 124988020 PBX1 JASPAR yes 124385814
chr12 124988011 124988032 ZNF263 JASPAR yes 124385815
chr12 124988012 124988024 PBX1 JASPAR yes 124385816
chr12 124988015 124988036 ZNF263 JASPAR yes 124385817
chr12 124988016 124988028 PBX1 JASPAR yes 124385818
Genes associated with rs554977577[chr12:124988019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More