EnhancerDB
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  3. rs554984883[chr17:39058167]
Enhancers that have rs554984883[chr17:39058167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554984883[chr17:39058167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39057945 39058601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757070
chr17 39058135 39058575 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757071
chr17 39058146 39058167 IRF1 JASPAR yes 54241953
chr17 39058147 39058168 IRF1 JASPAR yes 54241955
chr17 39058148 39058169 IRF1 JASPAR yes 54241957
chr17 39058148 39058724 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757072
chr17 39058149 39058170 IRF1 JASPAR yes 54241959
chr17 39058150 39058171 IRF1 JASPAR yes 54241961
chr17 39058152 39058167 FOXP1 JASPAR yes 54241963
chr17 39058154 39058169 PRDM1 JASPAR yes 54241964
chr17 39058161 39058179 NR3C1 JASPAR yes 54241965
chr17 39058166 39058171 GATA2 JASPAR yes 54241966
Genes associated with rs554984883[chr17:39058167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More