EnhancerDB
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  3. rs554997892[chr1:19325945]
Enhancers that have rs554997892[chr1:19325945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554997892[chr1:19325945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19325932 19325946 TLX1 JASPAR yes 27168917
chr1 19325933 19325945 TFAP2A JASPAR yes 27168918
chr1 19325933 19325945 TFAP2B JASPAR yes 27168919
chr1 19325933 19325945 TFAP2C JASPAR yes 27168920
chr1 19325933 19325948 TFAP2A JASPAR yes 27168921
chr1 19325934 19325945 TFAP2A JASPAR yes 27168922
Genes associated with rs554997892[chr1:19325945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More