EnhancerDB
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  3. rs555017192[chr1:225942413]
Enhancers that have rs555017192[chr1:225942413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555017192[chr1:225942413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225942359 225943098 SOX2 GTRD no Neural Stem Cells (H9) 21385748
chr1 225942396 225942414 SRF JASPAR yes 35767618
chr1 225942403 225943099 SOX2 GTRD no Neural Stem Cells (H9) 21385749
Genes associated with rs555017192[chr1:225942413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More