EnhancerDB
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  3. rs555050417[chr2:188410643]
Enhancers that have rs555050417[chr2:188410643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 188402465 188418715 enh19074
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Liver Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs555050417[chr2:188410643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 188410634 188410644 NFIA JASPAR yes 79519105
chr2 188410637 188410647 EN2 JASPAR yes 79519107
chr2 188410637 188410647 ESX1 JASPAR yes 79519108
chr2 188410637 188410647 GBX1 JASPAR yes 79519109
chr2 188410637 188410647 GBX2 JASPAR yes 79519110
chr2 188410637 188410647 HESX1 JASPAR yes 79519111
chr2 188410637 188410647 LBX2 JASPAR yes 79519112
chr2 188410637 188410647 LHX2 JASPAR yes 79519113
chr2 188410637 188410647 MIXL1 JASPAR yes 79519114
chr2 188410637 188410647 MNX1 JASPAR yes 79519115
chr2 188410637 188410647 RAX JASPAR yes 79519116
chr2 188410638 188410646 BARX1 JASPAR yes 79519120
chr2 188410638 188410646 BSX JASPAR yes 79519121
chr2 188410638 188410646 DLX6 JASPAR yes 79519122
chr2 188410638 188410646 ISX JASPAR yes 79519123
chr2 188410638 188410646 LBX1 JASPAR yes 79519124
chr2 188410638 188410646 LHX9 JASPAR yes 79519125
chr2 188410638 188410646 MSX1 JASPAR yes 79519126
chr2 188410638 188410646 MSX2 JASPAR yes 79519127
chr2 188410638 188410646 NKX6-2 JASPAR yes 79519128
chr2 188410638 188410646 PRRX1 JASPAR yes 79519129
chr2 188410638 188410646 RAX2 JASPAR yes 79519130
chr2 188410638 188410646 SHOX JASPAR yes 79519131
chr2 188410638 188410646 UNCX JASPAR yes 79519132
Genes associated with rs555050417[chr2:188410643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More