EnhancerDB
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  3. rs555126730[chr16:87499728]
Enhancers that have rs555126730[chr16:87499728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555126730[chr16:87499728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87498429 87500140 ZNF274 GTRD no Cervix (HeLa-S3) 21733366
chr16 87498429 87500140 ZNF274 GTRD no Cervix (HeLa-S3) 108219304
chr16 87498559 87499754 ZNF274 GTRD no Cervix (HeLa-S3) 21733367
chr16 87498559 87499754 ZNF274 GTRD no Cervix (HeLa-S3) 108219305
chr16 87498844 87500220 ZNF274 GTRD no Cervix (HeLa-S3) 21733374
chr16 87498844 87500220 ZNF274 GTRD no Cervix (HeLa-S3) 108219312
chr16 87498872 87500006 ZBTB33 GTRD no Brain (SK-N-SH) 21733379
chr16 87498872 87500006 ZBTB33 GTRD no Brain (SK-N-SH) 108219317
chr16 87498895 87499832 ZNF274 GTRD no Cervix (HeLa-S3) 21733381
chr16 87498895 87499832 ZNF274 GTRD no Cervix (HeLa-S3) 108219319
chr16 87498951 87499823 ZNF274 GTRD no Cervix (HeLa-S3) 21733395
chr16 87498951 87499823 ZNF274 GTRD no Cervix (HeLa-S3) 108219335
chr16 87498993 87499732 ZBTB33 GTRD no Brain (SK-N-SH) 21733408
chr16 87498993 87499732 ZBTB33 GTRD no Brain (SK-N-SH) 108219350
chr16 87498995 87500481 ZNF274 GTRD no Cervix (HeLa-S3) 21733409
chr16 87498995 87500481 ZNF274 GTRD no Cervix (HeLa-S3) 108219351
chr16 87499095 87499960 ZNF274 GTRD no Cervix (HeLa-S3) 21733423
chr16 87499095 87499960 ZNF274 GTRD no Cervix (HeLa-S3) 108219366
chr16 87499723 87499737 SPIC JASPAR yes 12218932
chr16 87499725 87499739 PAX6 JASPAR yes 12218933
Genes associated with rs555126730[chr16:87499728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More