EnhancerDB
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  3. rs555169553[chr3:10231963]
Enhancers that have rs555169553[chr3:10231963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555169553[chr3:10231963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10231953 10231974 IRF1 JASPAR yes 362496
chr3 10231955 10231970 STAT2 JASPAR yes 362499
chr3 10231956 10231970 STAT1 JASPAR yes 362500
chr3 10231957 10231972 IRF9 JASPAR yes 362501
chr3 10231957 10231978 IRF1 JASPAR yes 362502
chr3 10231958 10231973 FOXP1 JASPAR yes 362503
chr3 10231958 10231979 IRF1 JASPAR yes 362504
chr3 10231959 10231980 IRF1 JASPAR yes 362505
chr3 10231960 10231975 FOXP1 JASPAR yes 362506
chr3 10231960 10231981 IRF1 JASPAR yes 362507
chr3 10231962 10231977 FOXP1 JASPAR yes 362508
chr3 10231963 10231978 FOXP1 JASPAR yes 362509
Genes associated with rs555169553[chr3:10231963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More