EnhancerDB
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Enhancers that have rs555183133[chr12:52540973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr12 52540964 52541526 vista13445
VISTA
Transcript factors that have rs555183133[chr12:52540973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033122
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033123
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033124
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033125
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546373
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033126
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033127
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033128
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033129
chr12 52540365 52541062 TCF7L2 GTRD no Colon (HCT116) 21546382
chr12 52540365 52541062 TCF7L2 GTRD no Colon (HCT116) 108033140
chr12 52540365 52541062 TCF7L2 GTRD no Colon (HCT116) 108033141
chr12 52540454 52541110 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033143
chr12 52540454 52541110 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033144
chr12 52540635 52541295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546384
chr12 52540635 52541295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033145
chr12 52540922 52541201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546385
chr12 52540922 52541201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033146
chr12 52540944 52541169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546386
chr12 52540944 52541169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033147
Genes associated with rs555183133[chr12:52540973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More