EnhancerDB
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  3. rs555190450[chr1:45194389]
Enhancers that have rs555190450[chr1:45194389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45192844 45199975 enh313
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555190450[chr1:45194389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45194379 45194400 IRF1 JASPAR yes 28577759
chr1 45194382 45194403 IRF1 JASPAR yes 28577760
chr1 45194383 45194404 IRF1 JASPAR yes 28577761
chr1 45194384 45194405 IRF1 JASPAR yes 28577762
chr1 45194385 45194400 FOXP1 JASPAR yes 28577763
chr1 45194385 45194406 IRF1 JASPAR yes 28577764
chr1 45194386 45194407 IRF1 JASPAR yes 28577765
chr1 45194387 45194402 FOXP1 JASPAR yes 28577766
chr1 45194387 45194408 IRF1 JASPAR yes 28577767
chr1 45194388 45194403 FOXP1 JASPAR yes 28577768
chr1 45194388 45194409 IRF1 JASPAR yes 28577769
chr1 45194389 45194404 FOXP1 JASPAR yes 28577770
chr1 45194389 45194410 IRF1 JASPAR yes 28577771
Genes associated with rs555190450[chr1:45194389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More