EnhancerDB
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  3. rs555226766[chr19:2549121]
Enhancers that have rs555226766[chr19:2549121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555226766[chr19:2549121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2549112 2549124 ZBTB7B JASPAR yes 112073174
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 21837092
chr19 2549112 2549647 TCF7L2 GTRD no Colon (HCT116) 108362401
chr19 2549113 2549128 ZIC4 JASPAR yes 112073175
Genes associated with rs555226766[chr19:2549121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More