EnhancerDB
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  3. rs555233470[chr1:201508148]
Enhancers that have rs555233470[chr1:201508148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs555233470[chr1:201508148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201504923 201508385 ZNF274 GTRD no Cervix (HeLa-S3) 21364520
chr1 201505073 201508220 ZNF274 GTRD no Cervix (HeLa-S3) 21364523
chr1 201505228 201509085 ZNF143 GTRD no Epithelial (MCF-7) 107856609
chr1 201506463 201508231 ZNF274 GTRD no Cervix (HeLa-S3) 21364551
chr1 201507652 201509722 POLR2A UCSC Txn Factor no Conserved 107856610
chr1 201507934 201508530 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107856611
chr1 201507947 201508451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364572
chr1 201508054 201508430 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21364573
chr1 201508146 201508159 TFAP2A JASPAR yes 34504039
chr1 201508146 201508159 TFAP2B JASPAR yes 34504040
chr1 201508146 201508159 TFAP2C JASPAR yes 34504041
Genes associated with rs555233470[chr1:201508148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More