EnhancerDB
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  3. rs555239198[chr12:52604900]
Enhancers that have rs555239198[chr12:52604900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555239198[chr12:52604900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52604534 52605416 ZNF143 GTRD no Epithelial (MCF-7) 21546718
chr12 52604645 52605482 ZNF143 GTRD no Epithelial (MCF-7) 21546719
chr12 52604744 52605303 ZNF274 GTRD no Cervix (HeLa-S3) 21546720
chr12 52604822 52605177 ZNF274 GTRD no Cervix (HeLa-S3) 21546721
chr12 52604842 52605186 ZBTB33 GTRD no Brain (SK-N-SH) 21546722
chr12 52604898 52604903 SP1 TRANSFAC yes 120928507
Genes associated with rs555239198[chr12:52604900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More