EnhancerDB
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  3. rs555242151[chr5:179195239]
Enhancers that have rs555242151[chr5:179195239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179185005 179195695 enh8908
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs555242151[chr5:179195239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179195233 179195245 NHLH1 JASPAR yes 68189214
chr5 179195236 179195241 USF2 TRANSFAC yes 68189215
Genes associated with rs555242151[chr5:179195239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More