EnhancerDB
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  3. rs555330882[chr17:39058147]
Enhancers that have rs555330882[chr17:39058147]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555330882[chr17:39058147]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39057945 39058601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757070
chr17 39058135 39058575 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757071
chr17 39058144 39058159 FOXP1 JASPAR yes 54241950
chr17 39058145 39058160 FOXP1 JASPAR yes 54241951
chr17 39058146 39058161 FOXP1 JASPAR yes 54241952
chr17 39058146 39058167 IRF1 JASPAR yes 54241953
chr17 39058147 39058162 FOXP1 JASPAR yes 54241954
chr17 39058147 39058168 IRF1 JASPAR yes 54241955
Genes associated with rs555330882[chr17:39058147], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More