EnhancerDB
  1. Home
  2. SNP
  3. rs555333536[chr2:38931346]
Enhancers that have rs555333536[chr2:38931346]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs555333536[chr2:38931346]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38931335 38931346 PROP1 JASPAR yes 73167499
chr2 38931337 38931347 HOXA13 JASPAR yes 73167501
chr2 38931337 38931347 HOXD13 JASPAR yes 73167502
chr2 38931337 38931348 HOXA10 JASPAR yes 73167503
chr2 38931338 38931347 CDX1 JASPAR yes 73167504
chr2 38931338 38931349 CDX2 JASPAR yes 73167505
chr2 38931342 38931354 FOXC2 JASPAR yes 73167506
chr2 38931344 38931348 YY1 TRANSFAC yes 73167507
Genes associated with rs555333536[chr2:38931346], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More