EnhancerDB
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Enhancers that have rs555372139[chr12:49624318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49623729 49631475 enh2326
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs555372139[chr12:49624318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49620992 49624476 ZNF274 GTRD no Blood (GM12878) 21544447
chr12 49620992 49624476 ZNF274 GTRD no Blood (GM12878) 108029850
chr12 49621106 49624579 ZNF274 GTRD no Blood (GM12878) 21544448
chr12 49621106 49624579 ZNF274 GTRD no Blood (GM12878) 108029851
chr12 49621241 49624641 ZNF274 GTRD no Blood (GM12878) 21544449
chr12 49621241 49624641 ZNF274 GTRD no Blood (GM12878) 108029853
chr12 49621241 49624641 ZNF274 GTRD no Blood (GM12878) 108029854
chr12 49621593 49624634 ZNF274 GTRD no Blood (GM12878) 21544452
chr12 49621593 49624634 ZNF274 GTRD no Blood (GM12878) 108029858
chr12 49621593 49624634 ZNF274 GTRD no Blood (GM12878) 108029859
chr12 49621714 49624497 ZNF274 GTRD no Blood (GM12878) 21544455
chr12 49621714 49624497 ZNF274 GTRD no Blood (GM12878) 108029862
chr12 49621851 49624342 ZNF274 GTRD no Blood (GM12878) 21544456
chr12 49621851 49624342 ZNF274 GTRD no Blood (GM12878) 108029865
chr12 49622031 49624975 TCF7L2 GTRD no Colon (HCT116) 108029871
chr12 49622031 49624975 TCF7L2 GTRD no Colon (HCT116) 108029872
chr12 49622159 49624715 ZBTB33 GTRD no Lung (A549) 108029883
chr12 49622159 49624715 ZBTB33 GTRD no Lung (A549) 108029884
chr12 49622290 49624711 ZNF274 GTRD no Blood (GM12878) 21544477
chr12 49622290 49624711 ZNF274 GTRD no Blood (GM12878) 108029924
chr12 49622290 49624711 ZNF274 GTRD no Blood (GM12878) 108029925
chr12 49622372 49624468 ZBTB33 GTRD no Lung (A549) 108029943
chr12 49622406 49624586 ZBTB33 GTRD no Lung (A549) 108029951
chr12 49622472 49624362 ZBTB33 GTRD no Lung (A549) 108029962
chr12 49622502 49624717 ZBTB33 GTRD no Lung (A549) 108029968
chr12 49622502 49624717 ZBTB33 GTRD no Lung (A549) 108029969
chr12 49622567 49624496 ZBTB33 GTRD no Lung (A549) 108029980
chr12 49622595 49624320 ZNF274 GTRD no Liver (HepG2) 108029990
chr12 49622597 49624577 ZBTB33 GTRD no Lung (A549) 108029991
chr12 49623086 49624709 TCF7L2 GTRD no Colon (HCT116) 108030017
chr12 49624230 49624622 ZNF274 GTRD no Blood (GM12878) 21544499
chr12 49624230 49624622 ZNF274 GTRD no Blood (GM12878) 108030018
chr12 49624303 49624318 SOX21 JASPAR yes 120766529
chr12 49624314 49624329 ZIC4 JASPAR yes 120766531
chr12 49624315 49624329 ZIC1 JASPAR yes 120766532
Genes associated with rs555372139[chr12:49624318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More