EnhancerDB
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  3. rs555398472[chr12:58293905]
Enhancers that have rs555398472[chr12:58293905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555398472[chr12:58293905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58293489 58294044 ZNF274 GTRD no Bone Marrow (K562) 21551725
chr12 58293892 58293907 FOXP1 JASPAR yes 121148977
chr12 58293894 58293905 FOXC1 JASPAR yes 121148978
chr12 58293894 58293906 FOXC2 JASPAR yes 121148979
chr12 58293895 58293906 FOXP2 JASPAR yes 121148980
chr12 58293897 58293906 SRY JASPAR yes 121148982
chr12 58293899 58293920 IRF1 JASPAR yes 121148983
chr12 58293904 58293919 FOXP1 JASPAR yes 121148984
chr12 58293905 58293920 FOXP1 JASPAR yes 121148985
Genes associated with rs555398472[chr12:58293905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More