EnhancerDB
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  3. rs555471615[chr19:13945022]
Enhancers that have rs555471615[chr19:13945022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555471615[chr19:13945022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389982
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389983
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851599
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389984
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389985
chr19 13943896 13945645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389986
chr19 13943896 13945645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389987
chr19 13944016 13945153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851600
chr19 13944016 13945153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389988
chr19 13944016 13945153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389989
chr19 13944163 13945640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851607
chr19 13944163 13945640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390013
chr19 13944163 13945640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390014
chr19 13944362 13945022 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851617
chr19 13944362 13945022 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390040
chr19 13944481 13945124 CTCF UCSC Txn Factor no Conserved 108390086
chr19 13944523 13945179 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21851662
chr19 13944523 13945179 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390100
chr19 13944601 13945602 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851684
chr19 13944601 13945602 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390126
chr19 13944876 13945406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851690
chr19 13945009 13945022 ZBED1 JASPAR yes 112535742
chr19 13945013 13945025 HES5 JASPAR yes 112535743
chr19 13945013 13945025 PKNOX2 JASPAR yes 112535744
chr19 13945013 13945025 TGIF2 JASPAR yes 112535745
Genes associated with rs555471615[chr19:13945022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More