EnhancerDB
  1. Home
  2. SNP
  3. rs555510643[chr19:13950425]
Enhancers that have rs555510643[chr19:13950425]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555510643[chr19:13950425]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949267 13950520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851741
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13949875 13950439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851792
chr19 13949926 13950502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851803
chr19 13949938 13950454 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851804
chr19 13949948 13950524 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851807
chr19 13950084 13950648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851812
chr19 13950127 13950811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851813
chr19 13950147 13950651 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851814
chr19 13950159 13950623 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21851815
chr19 13950280 13950640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851816
chr19 13950347 13950657 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21851817
chr19 13950349 13950713 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851818
chr19 13950360 13950604 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851819
chr19 13950360 13950856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851820
chr19 13950387 13950631 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851821
chr19 13950391 13950581 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21851822
chr19 13950411 13950867 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851823
chr19 13950422 13950432 ZNF740 JASPAR yes 112536570
chr19 13950422 13950443 ZNF263 JASPAR yes 112536571
chr19 13950423 13950433 ZNF740 JASPAR yes 112536572
Genes associated with rs555510643[chr19:13950425], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More