EnhancerDB
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  3. rs555523226[chr1:225958719]
Enhancers that have rs555523226[chr1:225958719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555523226[chr1:225958719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225957940 225958819 SOX2 GTRD no Neural Stem Cells (H9) 21385872
chr1 225957951 225958843 SOX2 GTRD no Neural Stem Cells (H9) 21385873
chr1 225958026 225958741 SOX2 GTRD no Neural Stem Cells (H9) 21385876
chr1 225958564 225958900 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385884
chr1 225958578 225958918 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385885
chr1 225958605 225958895 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385886
chr1 225958655 225958915 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385887
chr1 225958699 225958929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385888
chr1 225958704 225958928 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385889
Genes associated with rs555523226[chr1:225958719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More