EnhancerDB
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  3. rs555560231[chr1:25045172]
Enhancers that have rs555560231[chr1:25045172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555560231[chr1:25045172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25045167 25045182 FOXP1 JASPAR yes 27522566
chr1 25045168 25045183 FOXP1 JASPAR yes 27522567
chr1 25045169 25045184 FOXP1 JASPAR yes 27522568
Genes associated with rs555560231[chr1:25045172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More