EnhancerDB
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  3. rs555569816[chr17:40570247]
Enhancers that have rs555569816[chr17:40570247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555569816[chr17:40570247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40570236 40570257 IRF1 JASPAR yes 54303762
chr17 40570237 40570258 IRF1 JASPAR yes 54303763
chr17 40570240 40570251 ETV2 JASPAR yes 54303765
chr17 40570240 40570254 SPIC JASPAR yes 54303766
chr17 40570241 40570249 FEV JASPAR yes 54303767
chr17 40570241 40570262 IRF1 JASPAR yes 54303768
chr17 40570242 40570263 IRF1 JASPAR yes 54303769
chr17 40570243 40570248 ETS2 TRANSFAC yes 54303770
chr17 40570243 40570264 IRF1 JASPAR yes 54303771
chr17 40570244 40570265 IRF1 JASPAR yes 54303772
chr17 40570245 40570260 FOXP1 JASPAR yes 54303773
chr17 40570245 40570266 IRF1 JASPAR yes 54303774
chr17 40570246 40570261 FOXP1 JASPAR yes 54303775
chr17 40570246 40570267 IRF1 JASPAR yes 54303776
chr17 40570247 40570262 FOXP1 JASPAR yes 54303777
Genes associated with rs555569816[chr17:40570247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More