EnhancerDB
  1. Home
  2. SNP
  3. rs555586422[chr5:172169424]
Enhancers that have rs555586422[chr5:172169424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555586422[chr5:172169424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172169403 172169424 IRF1 JASPAR yes 67820976
chr5 172169404 172169425 IRF1 JASPAR yes 67820978
chr5 172169410 172169425 FOXP1 JASPAR yes 67820983
chr5 172169410 172169431 IRF1 JASPAR yes 67820984
chr5 172169412 172169427 FOXP1 JASPAR yes 67820985
Genes associated with rs555586422[chr5:172169424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More