EnhancerDB
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  3. rs555588514[chr6:12348415]
Enhancers that have rs555588514[chr6:12348415]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs555588514[chr6:12348415]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12348394 12348415 IRF1 JASPAR yes 99964103
chr6 12348394 12348415 ZNF263 JASPAR yes 99964104
chr6 12348398 12348419 IRF1 JASPAR yes 99964105
chr6 12348398 12348419 ZNF263 JASPAR yes 99964106
chr6 12348402 12348423 IRF1 JASPAR yes 99964107
chr6 12348402 12348423 ZNF263 JASPAR yes 99964108
chr6 12348406 12348427 IRF1 JASPAR yes 99964109
chr6 12348406 12348427 ZNF263 JASPAR yes 99964110
chr6 12348407 12348428 ZNF263 JASPAR yes 99964111
chr6 12348410 12348431 ZNF263 JASPAR yes 99964112
chr6 12348411 12348432 ZNF263 JASPAR yes 99964113
chr6 12348414 12348435 IRF1 JASPAR yes 99964114
chr6 12348414 12348435 ZNF263 JASPAR yes 99964115
chr6 12348415 12348436 ZNF263 JASPAR yes 99964116
Genes associated with rs555588514[chr6:12348415], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More