EnhancerDB
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  3. rs555618593[chr1:225883574]
Enhancers that have rs555618593[chr1:225883574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555618593[chr1:225883574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225879708 225883685 ZNF274 GTRD no Bone Marrow (K562) 107874699
chr1 225879712 225883618 ZNF274 GTRD no Blood (GM12878) 107874700
chr1 225879837 225883630 ZNF274 GTRD no Bone Marrow (K562) 107874702
chr1 225880415 225883661 ZNF274 GTRD no Bone Marrow (K562) 107874706
chr1 225880455 225883611 ZNF274 GTRD no Liver (HepG2) 21385307
chr1 225880455 225883611 ZNF274 GTRD no Liver (HepG2) 107874707
chr1 225880455 225883634 ZNF274 GTRD no Blood (GM12878) 107874708
chr1 225880800 225883680 ZNF274 GTRD no Bone Marrow (K562) 107874716
chr1 225880844 225883680 ZNF274 GTRD no Bone Marrow (K562) 107874720
chr1 225880910 225883681 ZBTB33 GTRD no Lung (A549) 107874725
chr1 225880915 225883607 ZBTB33 GTRD no Lung (A549) 107874726
chr1 225880932 225883667 ZNF274 GTRD no Blood (GM12878) 107874728
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 21385320
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 107874733
chr1 225881067 225883678 ZNF274 GTRD no Bone Marrow (K562) 107874737
chr1 225881185 225884290 TCF7L2 GTRD no Colon (HCT116) 107874740
chr1 225881291 225883676 ZBTB33 GTRD no Lung (A549) 107874746
chr1 225881349 225884207 TCF7L2 GTRD no Colon (HCT116) 107874748
chr1 225881454 225884242 TCF7L2 GTRD no Colon (HCT116) 107874761
chr1 225881471 225883667 TCF7L2 GTRD no Colon (HCT116) 107874762
chr1 225881480 225883592 ZNF274 GTRD no Bone Marrow (K562) 107874763
chr1 225881541 225883689 ZBTB33 GTRD no Lung (A549) 107874770
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 21385332
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 107874771
chr1 225881597 225883679 ZNF274 GTRD no Blood (GM12878) 107874780
chr1 225881606 225883576 TCF7L2 GTRD no Colon (HCT116) 107874781
chr1 225881742 225883614 ZBTB33 GTRD no Lung (A549) 107874797
chr1 225881881 225883650 ZNF274 GTRD no Cervix (HeLa-S3) 21385357
chr1 225881881 225883650 ZNF274 GTRD no Cervix (HeLa-S3) 107874827
chr1 225881951 225883643 ZBTB33 GTRD no Lung (A549) 107874843
chr1 225882011 225883617 ZBTB33 GTRD no Lung (A549) 107874856
chr1 225882084 225883589 ZNF274 GTRD no Cervix (HeLa-S3) 21385384
chr1 225882084 225883589 ZNF274 GTRD no Cervix (HeLa-S3) 107874885
chr1 225882911 225883620 ZNF274 GTRD no Cervix (HeLa-S3) 21385421
chr1 225883571 225883586 MEF2C JASPAR yes 35762818
chr1 225883572 225883587 MEF2A JASPAR yes 35762819
chr1 225883573 225883585 MEF2A JASPAR yes 35762820
chr1 225883573 225883585 MEF2B JASPAR yes 35762821
chr1 225883573 225883585 MEF2D JASPAR yes 35762822
chr1 225883574 225883584 MEF2A JASPAR yes 35762823
Genes associated with rs555618593[chr1:225883574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More