EnhancerDB
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  3. rs555649641[chr19:13946452]
Enhancers that have rs555649641[chr19:13946452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555649641[chr19:13946452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13946055 13947136 P63 GTRD no Skin (Keratinocyte) 21851692
chr19 13946091 13947136 P63 GTRD no Skin (Keratinocyte) 21851693
chr19 13946189 13947093 P63 GTRD no Skin (Keratinocyte) 21851694
chr19 13946245 13946815 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21851695
chr19 13946287 13947138 P63 GTRD no Skin (Keratinocyte) 21851696
chr19 13946354 13946884 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851697
chr19 13946403 13948393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851698
chr19 13946437 13946452 FOXP1 JASPAR yes 112535964
chr19 13946438 13946453 FOXP1 JASPAR yes 112535965
chr19 13946438 13946459 IRF1 JASPAR yes 112535966
chr19 13946439 13946454 FOXP1 JASPAR yes 112535967
chr19 13946441 13946456 FOXP1 JASPAR yes 112535968
chr19 13946442 13946457 STAT2 JASPAR yes 112535969
chr19 13946443 13946458 FOXP1 JASPAR yes 112535970
chr19 13946443 13946464 IRF1 JASPAR yes 112535971
chr19 13946444 13946465 IRF1 JASPAR yes 112535972
chr19 13946445 13946457 FOXC2 JASPAR yes 112535973
chr19 13946445 13946465 RREB1 JASPAR yes 112535974
chr19 13946446 13946457 FOXP2 JASPAR yes 112535975
chr19 13946448 13946463 FOXP1 JASPAR yes 112535976
chr19 13946449 13946470 IRF1 JASPAR yes 112535977
chr19 13946450 13946465 FOXP1 JASPAR yes 112535978
chr19 13946450 13946470 RREB1 JASPAR yes 112535979
chr19 13946450 13946471 IRF1 JASPAR yes 112535980
chr19 13946451 13946466 FOXP1 JASPAR yes 112535981
chr19 13946451 13946472 IRF1 JASPAR yes 112535982
chr19 13946452 13946467 FOXP1 JASPAR yes 112535983
chr19 13946452 13946473 IRF1 JASPAR yes 112535984
Genes associated with rs555649641[chr19:13946452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More