EnhancerDB
  1. Home
  2. SNP
  3. rs555677103[chr1:231530129]
Enhancers that have rs555677103[chr1:231530129]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555677103[chr1:231530129]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231530110 231530131 IRF1 JASPAR yes 36088814
chr1 231530116 231530137 IRF1 JASPAR yes 36088815
chr1 231530117 231530138 IRF1 JASPAR yes 36088816
chr1 231530118 231530133 PRDM1 JASPAR yes 36088820
chr1 231530119 231530134 PRDM1 JASPAR yes 36088821
chr1 231530120 231530134 STAT1 JASPAR yes 36088822
chr1 231530122 231530143 IRF1 JASPAR yes 36088823
chr1 231530124 231530129 ETS2 TRANSFAC yes 36088824
chr1 231530126 231530141 FOXP1 JASPAR yes 36088825
chr1 231530127 231530142 FOXP1 JASPAR yes 36088826
chr1 231530128 231530143 FOXP1 JASPAR yes 36088827
chr1 231530129 231530144 FOXP1 JASPAR yes 36088828
Genes associated with rs555677103[chr1:231530129], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More