EnhancerDB
  1. Home
  2. SNP
  3. rs555757780[chr1:55034498]
Enhancers that have rs555757780[chr1:55034498]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555757780[chr1:55034498]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55034487 55034505 ESR2 JASPAR yes 28993492
chr1 55034488 55034505 ESR1 JASPAR yes 28993493
chr1 55034489 55034509 ESR1 JASPAR yes 28993494
chr1 55034496 55034507 ESRRB JASPAR yes 28993495
chr1 55034498 55034501 MYB TRANSFAC yes 28993496
chr1 55034498 55034506 SF1 TRANSFAC yes 28993497
Genes associated with rs555757780[chr1:55034498], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More